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[D] Spectroscopy Binary Classification

I’m trying to build a pipeline to detect the presence of a compound in spectroscopic data. I have ~100 samples that consist of vectors of size 1000 representing a specific frequency band. At first, I was thinking of using a CNN because I’m trying to detect patterns, but these patterns are location dependent since they represent absorption at a given frequency. I’m not sure where to go from here so any advice is appreciated.

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